Publications
Cell Biophysics
  1. Köster, D., Lamaze, C., Sinha, B.*, Nassoy, P, Coupling total internal reflection microscopy to cell stretching to probe membrane function under stress. (Manuscript in preparation) (*corresponding author).
  2. Sinha, B*, Köster, D.*, Ruez, R., Gonnord, P., Bastiani, M., Abankwa, D., Stan, R., Johannes, L., Morone N., Parton, R., Raposo, G., Sens, P., Lamaze, C. and Nassoy, P. (2011) Cells respond to mechanical stress by rapid disassembly of caveolae. Cell 144, 402-403. (*equal contribution) Referred to by the Preview: Mayor, S. (2011) Need Tension Relief Fast? Try Caveolae Cell 144, 323-324. Cell PaperFlick Video Abstract : http://www.youtube.com/watch?feature=player_embedded&v=X1ALpdliWOw
  3. Sinha, D.K., Banerjee, B., Maharana, S., and Shivashankar, G.V. (2008). Probing the dynamic organization of transcription compartments and gene loci within the nucleus of living cells. Biophys J 95, 5432-5438. http://www.cell.com/biophysj/retrieve/pii/S0006349508789665
  4. Rao, J., Bhattacharya, D., Banerjee, B., Sarin, A., and Shivashankar, G.V. (2007). Trichostatin-A induces differential changes in histone protein dynamics and expression in HeLa cells. Biochem Biophys Res Commun 363, 263-268. http://www.ncbi.nlm.nih.gov/pubmed/17869223
  5. Banerjee, B., Bhattacharya, D., and Shivashankar, G.V. (2006). Chromatin structure exhibits spatio-temporal heterogeneity within the cell nucleus. Biophys J 91, 2297-2303.(COVER PAGE) http://www.biophysj.org/cgi/content/full/91/6/2297
  6. Krishna, S., Banerjee, B., Ramakrishnan, T.V., and Shivashankar, G.V. (2005). Stochastic simulations of the origins and implications of long-tailed distributions in gene expression. Proc Natl Acad Sci U S A 102, 4771-4776. http://www.pnas.org/cgi/content/full/102/13/4771
  7. Banerjee, B., Balasubramanian, S., Ananthakrishna, G., Ramakrishnan, T.V., and Shivashankar, G.V. (2004). Tracking operator state fluctuations in gene expression in single cells. Biophys J 86, 3052-3059. http://www.biophysj.org/cgi/content/full/86/5/3052
  8. Sinha, D.K., Bhattacharya D., Banerjee, B., Hameed, F.M., and Shivashankar, G.V. (2004). Development of single molecule tracking fluorescence microscope combined with force spectroscopy for gene expression analysis. Current Sc 87, 239-244.

BOOK CHAPTER:

  1. Sinha, B., Bhattacharya, D., Sinha, D.K., Talwar, S., Maharana, S., Gupta, S., Shivashankar, G.V. Dynamic organization of chromatin assembly and transcription factories in living cells. Methods Cell Biol 98, 57-78.